Hi, I want to use Python to generate individual cortex using T1 MRI like SPM, anyone knows how to do this?
Hello @BarryLiu97,
if I’m understanding correctly, you want to reconstruct cortical surfaces based on a T1-weighted MRI scan. You’ll want to use FreeSurfer for this purpose, running the recon-all
command. See this tutorial:
https://mne.tools/stable/auto_tutorials/forward/10_background_freesurfer.html
Once the surfaces have been generated, you can use FreeView to interactively visualize the surfaces.
Thank you so much for your reply!