The following error occurred while I was plotting the source estimate. The specified file could not be found. Includes white files and inflated files. I think this is a bug, because these files exist on my computer. As shown in the figure below, I have conducted many experiments.
method = "dSPM" snr = 3. lambda2 = 1. / snr ** 2 # lambda2=0.1111111111111111 stc = apply_inverse(epochs['Cue'].average(), inverse_operator, lambda2, method=method, pick_ori=None) brain = stc.plot(surface='white ', # or 'white' hemi='split', subjects_dir=subjects_dir, subject='test', time_viewer=True)
Here’s how I tested it
This is one
import mne import pathlib import numpy as np sample_data_folder = pathlib.Path('/home/meg') subjects_dir = sample_data_folder / "subjects" Brain = mne.viz.get_brain_class() brain = Brain( "test", hemi="both", surf="pial", subjects_dir=subjects_dir, size=(800, 600) ) brain.add_annotation("aparc.a2009s", borders=False)
This is a try with FreeView
I don’t know why it can’t find the file. This was done on the ubuntu20 OS.
Looking forward to your reply
- MNE version: 1.4.0
- operating system: Ubuntu 20.04