Source space brain image, 3D image plotting

[emihelj (E)]

Could somebody please provide a working colab that would plot some of the source space brain images or any 3D images from the example gallery. I have tried many combinations of pyvista, vtk, myavi, pyqt and pyside and still cannot make it work on a local setup. Thank you in advance

[richard (Richard Höchenberger)]

Hello and welcome to the forum! Are you asking about getting things to work locally, or do you want to get things to work on Google Colab…?

[emihelj (E)]

Thank you so much for a quick reply. It would be ideal if I could get it to run on a colab.

[richard (Richard Höchenberger)]

I don’t think Colab is something we currently support, as in, test with & ensure it works.

@GuillaumeFavelier might know more about 3D viz support on this particular platform.

[emihelj (E)]

Ok thank you for the quick answer

[GuillaumeFavelier]

Indeed, Google Colab is not supported yet. Jupyter Notebook is the best working platform at the moment for this need and Jupyter Lab is still a work in progress.

You can follow the related progress on the following thread on GitHub:

ENH: Notebook 3d backend improvements (ipyvtk)