Plot a subset of evoked responses?

Hi all,

I have calculated evoked responses of MEG measurements as follows:
epochs = mne.Epochs(raw, events, event_id, tmin, tmax, proj=True,
picks=picks_bp, baseline=(None,0), preload=True, reject=reject)
evoked = epochs.average()

I would like to plot a subset of 18 channels in a subpolt, each channel is
in its own plot.
I have divided the window as follows:
f, ((ax1, ax2), (ax3, ax4)) = plt.subplots(6, 3, sharex='col', sharey='row')

How can I now plot only a selected channels?

Thank you already in advance!

Regards,
Maria
-------------- next part --------------
An HTML attachment was scrubbed...
URL: http://mail.nmr.mgh.harvard.edu/pipermail/mne_analysis/attachments/20140825/7a2d1c05/attachment.html

hi Maria,

see attached.

HTH
Alex

Hi all,

I have calculated evoked responses of MEG measurements as follows:
epochs = mne.Epochs(raw, events, event_id, tmin, tmax, proj=True,
picks=picks_bp, baseline=(None,0), preload=True, reject=reject)
evoked = epochs.average()

I would like to plot a subset of 18 channels in a subpolt, each channel is
in its own plot.
I have divided the window as follows:
f, ((ax1, ax2), (ax3, ax4)) = plt.subplots(6, 3, sharex='col', sharey='row')

How can I now plot only a selected channels?

Thank you already in advance!

Regards,
Maria

_______________________________________________
Mne_analysis mailing list
Mne_analysis at nmr.mgh.harvard.edu
Mne_analysis Info Page

The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the
e-mail
contains patient information, please contact the Partners Compliance
HelpLine at
MyComplianceReport.com: Compliance and Ethics Reporting . If the e-mail was sent to you in
error
but does not contain patient information, please contact the sender and
properly
dispose of the e-mail.

-------------- next part --------------
A non-text attachment was scrubbed...
Name: demo_maria.py
Type: text/x-python-script
Size: 786 bytes
Desc: not available
Url : http://mail.nmr.mgh.harvard.edu/pipermail/mne_analysis/attachments/20140825/38d8e6f3/attachment.bin

Many thanks for your answer.
I copied that loop in my script.
However, I get an error:

idx = 0
      ^
SyntaxError: invalid syntax

I wonder what could be wrong there?

-Maria

2014-08-25 13:47 GMT+03:00 Alexandre Gramfort <
alexandre.gramfort at telecom-paristech.fr>:

hi Maria,

see attached.

HTH
Alex

> Hi all,
>
> I have calculated evoked responses of MEG measurements as follows:
> epochs = mne.Epochs(raw, events, event_id, tmin, tmax, proj=True,
> picks=picks_bp, baseline=(None,0), preload=True, reject=reject)
> evoked = epochs.average()
>
> I would like to plot a subset of 18 channels in a subpolt, each channel
is
> in its own plot.
> I have divided the window as follows:
> f, ((ax1, ax2), (ax3, ax4)) = plt.subplots(6, 3, sharex='col',
sharey='row')
>
> How can I now plot only a selected channels?
>
> Thank you already in advance!
>
> Regards,
> Maria
>
> _______________________________________________
> Mne_analysis mailing list
> Mne_analysis at nmr.mgh.harvard.edu
> Mne_analysis Info Page
>
>
> The information in this e-mail is intended only for the person to whom
it is
> addressed. If you believe this e-mail was sent to you in error and the
> e-mail
> contains patient information, please contact the Partners Compliance
> HelpLine at
> MyComplianceReport.com: Compliance and Ethics Reporting . If the e-mail was sent to you
in
> error
> but does not contain patient information, please contact the sender and
> properly
> dispose of the e-mail.
>

_______________________________________________
Mne_analysis mailing list
Mne_analysis at nmr.mgh.harvard.edu
Mne_analysis Info Page

The information in this e-mail is intended only for the person to whom it
is
addressed. If you believe this e-mail was sent to you in error and the
e-mail
contains patient information, please contact the Partners Compliance
HelpLine at
MyComplianceReport.com: Compliance and Ethics Reporting . If the e-mail was sent to you in
error
but does not contain patient information, please contact the sender and
properly
dispose of the e-mail.

-------------- next part --------------
An HTML attachment was scrubbed...
URL: http://mail.nmr.mgh.harvard.edu/pipermail/mne_analysis/attachments/20140825/25789b44/attachment.html

I managed to solve this already. The error came from the previous line.

-Maria

2014-08-25 18:36 GMT+03:00 Maria Hakonen <maria.hakonen at gmail.com>:

Many thanks for your answer.
I copied that loop in my script.
However, I get an error:

idx = 0
      ^
SyntaxError: invalid syntax

I wonder what could be wrong there?

-Maria

2014-08-25 13:47 GMT+03:00 Alexandre Gramfort <
alexandre.gramfort at telecom-paristech.fr>:

hi Maria,

see attached.

HTH
Alex

> Hi all,
>
> I have calculated evoked responses of MEG measurements as follows:
> epochs = mne.Epochs(raw, events, event_id, tmin, tmax, proj=True,
> picks=picks_bp, baseline=(None,0), preload=True, reject=reject)
> evoked = epochs.average()
>
> I would like to plot a subset of 18 channels in a subpolt, each channel
is
> in its own plot.
> I have divided the window as follows:
> f, ((ax1, ax2), (ax3, ax4)) = plt.subplots(6, 3, sharex='col',
sharey='row')
>
> How can I now plot only a selected channels?
>
> Thank you already in advance!
>
> Regards,
> Maria
>
> _______________________________________________
> Mne_analysis mailing list
> Mne_analysis at nmr.mgh.harvard.edu
> Mne_analysis Info Page
>
>
> The information in this e-mail is intended only for the person to whom
it is
> addressed. If you believe this e-mail was sent to you in error and the
> e-mail
> contains patient information, please contact the Partners Compliance
> HelpLine at
> MyComplianceReport.com: Compliance and Ethics Reporting . If the e-mail was sent to you
in
> error
> but does not contain patient information, please contact the sender and
> properly
> dispose of the e-mail.
>

_______________________________________________
Mne_analysis mailing list
Mne_analysis at nmr.mgh.harvard.edu
Mne_analysis Info Page

The information in this e-mail is intended only for the person to whom it
is
addressed. If you believe this e-mail was sent to you in error and the
e-mail
contains patient information, please contact the Partners Compliance
HelpLine at
MyComplianceReport.com: Compliance and Ethics Reporting . If the e-mail was sent to you
in error
but does not contain patient information, please contact the sender and
properly
dispose of the e-mail.

-------------- next part --------------
An HTML attachment was scrubbed...
URL: http://mail.nmr.mgh.harvard.edu/pipermail/mne_analysis/attachments/20140825/57a56c2f/attachment.html