Hello Isaiah,
Please join the mne_analysis list and send your questions directly there, more people to answer them.
Hello Matti,
I have a few questions of clarification below and one question that is preventing me from moving forward (under Kept Going).Previous Questions: I have the MRI data, but I am confused as to how to proceed with the mne_setup_mri for the brain, skull and scalp volume conduction models because the brain and T1 are the defaults. Do I need to add some other slices? And does the subject data need to be placed in /freesurfer/subjects for it to be read by MNE?
You do not actually need the mne_setup_mri, these data are only useful if you have Neuromag proprietary software at your disposal as well.
Kept Going:
The folder just contains two empty folders after implementing mne_organize_dicom. It seems that the DICOM images are not being read properly.
What kind of MRI data do you have? T1-weighted MPRAGES only?
- Matti