Mne_analysis Digest, Vol 79, Issue 12

?Nadia,
Is there a particular reason for why mne appears to be installed within
your freesurfer directory?? Can you confirm you have write permission on
/usr/local/freesurfer/mne/MNE-2.7.0-3106-Linux-x86_64/subjects/
This is not the recommended directory structure on a linux environment.

regards,
Kam

Again, try what happens when you run

$MNE_ROOT/bin/mne_make_source_space --help

- Matti