Hello, can't find a way to do this. Found an old thread that talks about
"updated MixedSourceEstimate.export_volumes_to_nifti to include an option
to export the surface activations as well" at
https://github.com/mne-tools/mne-python/pull/1462 . However, I can't find
documentation on using it, and it doesn't work if I try to use it
(AttributeError:
'MixedSourceEstimate' object has no attribute 'export_volumes_to_nifti').
Any help would be appreciated. Thanks, Lori
Dear Lori,
presently in MNE there is no function to export a surface activation
to a volume.
mri_surf2vol in freesurfer would be my approach but it would need
the high resolution activation as input.
please open an issue at : https://github.com/mne-tools/mne-python/issues
so you know when we implement this.
Best,
Alex
In the meantime, the code necessary to put a surface source estimate into a
NIfTI volume is in a work-in-progress pull request here:
https://github.com/mne-tools/mne-python/pull/4496/files#diff-c38906291c7d4fa5e1df2d494b9c27d2R129
Eric
Thank you for the replies. I previously figured out a (cumbersome) way of
getting a surface from stc into nifti, but really need a way to get the
mixed source space in. I will keep working on it. Best, Lori