MNE Coreg Segmentation Fault

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, ,
10

Ok, by prepending with the

MNE_3D_OPTION_DEPTH_PEELING=false

Now, the MNE logo stays up for longer, but I get the following error:

Using pyvistaqt 3d backend.

    Triangle neighbors and vertex normals...
Using high resolution head model in /home/alexdv/mne_data/MNE-sample-data/subjects/sample/surf/lh.seghead
    Triangle neighbors and vertex normals...
Estimating fiducials from fsaverage.
    Triangle neighbors and vertex normals...
Using high resolution head model in /home/alexdv/mne_data/MNE-sample-data/subjects/sample/surf/lh.seghead
    Triangle neighbors and vertex normals...
Estimating fiducials from fsaverage.
Estimating fiducials from fsaverage.
Placing MRI fiducials - LPA
Using lh.seghead for head surface.
Channel types:: eeg: 59
Placing MRI fiducials - LPA
Fatal Python error: Segmentation fault

Thread 0x00007f158e67b700 (most recent call first):
  File "/usr/lib/python3.8/threading.py", line 302 in wait
  File "/usr/lib/python3.8/queue.py", line 170 in get
  File "/home/alexdv/mne/lib/python3.8/site-packages/mne/gui/_coreg.py", line 671 in _run_worker
  File "/usr/lib/python3.8/threading.py", line 870 in run
  File "/usr/lib/python3.8/threading.py", line 932 in _bootstrap_inner
  File "/usr/lib/python3.8/threading.py", line 890 in _bootstrap

Thread 0x00007f158ee7c700 (most recent call first):
  File "/usr/lib/python3.8/threading.py", line 302 in wait
  File "/usr/lib/python3.8/queue.py", line 170 in get
  File "/home/alexdv/mne/lib/python3.8/site-packages/mne/gui/_coreg.py", line 671 in _run_worker
  File "/usr/lib/python3.8/threading.py", line 870 in run
  File "/usr/lib/python3.8/threading.py", line 932 in _bootstrap_inner
  File "/usr/lib/python3.8/threading.py", line 890 in _bootstrap

Current thread 0x00007f15e9b38740 (most recent call first):
  File "/home/alexdv/mne/lib/python3.8/site-packages/pyvista/plotting/plotting.py", line 1285 in render
  File "/home/alexdv/mne/lib/python3.8/site-packages/pyvistaqt/plotting.py", line 309 in _render
  File "/home/alexdv/mne/lib/python3.8/site-packages/mne/viz/backends/_qt.py", line 818 in show
  File "/home/alexdv/mne/lib/python3.8/site-packages/mne/gui/_coreg.py", line 300 in __init__
  File "<decorator-gen-570>", line 12 in __init__
  File "/home/alexdv/mne/lib/python3.8/site-packages/mne/gui/__init__.py", line 193 in coregistration
  File "<decorator-gen-558>", line 12 in coregistration
  File "/home/alexdv/mne/lib/python3.8/site-packages/mne/commands/mne_coreg.py", line 85 in run
  File "/home/alexdv/mne/lib/python3.8/site-packages/mne/commands/utils.py", line 107 in main
  File "/home/alexdv/mne/bin/mne", line 8 in <module>
Segmentation fault

Here is the sys_info again:

Platform: Linux-5.10.60.1-microsoft-standard-WSL2-x86_64-with-glibc2.29
Python: 3.8.10 (default, Nov 26 2021, 20:14:08) [GCC 9.3.0]
Executable: /home/alexdv/mne/bin/python3
CPU: x86_64: 6 cores
Memory: 19.5 GB

mne: 1.0.1
numpy: 1.22.2 {}
scipy: 1.8.0
matplotlib: 3.5.1 {backend=QtAgg}

sklearn: 1.0.2
numba: Not found
nibabel: 3.2.2
nilearn: Not found
dipy: Not found
cupy: Not found
pandas: 1.4.1
pyvista: 0.34.0 {OpenGL 3.3 (Core Profile) Mesa 21.2.6 via D3D12 (AMD Radeon™ Graphics)}
pyvistaqt: 0.9.0
ipyvtklink: Not found
vtk: 9.1.0
PyQt5: 5.12.3
ipympl: Not found
pooch: v1.6.0

mne_bids: Not found
mne_nirs: Not found
mne_features: Not found
mne_qt_browser: Not found
mne_connectivity: Not found