# Error using mne\_average\_estimates

**URL:** <https://mne.discourse.group/t/error-using-mne-average-estimates/422>\
**Category:** Mailing List Archive (read-only)\
**Tags:** list-archive\
**Created:** [March 30, 2012, 6:30pm UTC](https://mne.discourse.group/t/error-using-mne-average-estimates/422 "2012-03-30T18:30:14Z")\
**Posts on this page:** 12\
**Page:** 1

<div class="post-metadata">

**Author:** ![system](https://global.discourse-cdn.com/free1/uploads/mne/original/1X/85cc6bd2b69cb698a166dc6d880fb550510d0144.jpeg) [@system](https://mne.discourse.group/u/system)\
**Post date:** [March 30, 2012, 6:30pm UTC](https://mne.discourse.group/t/error-using-mne-average-estimates/422/1 "2012-03-30T18:30:14Z")

</div>

Hello,

I'm encountering an error running mne\_average\_estimates. The program  
successfully loads all my stc files and sets up the time scale, but then I  
get:

Temporal resampling...  
/\<path to my data\>/subj001\_ave-lh.stc .. LH .. [failed]

Before running mne\_average\_estimates, I had first created an average brain  
in Freesurfer (make\_average\_subject), then created morph maps from each  
subject to the average brain (mne\_make\_morph\_maps --from \<subject\> --to  
average), then for each subject did current estimates using mne\_make\_movie  
with "--morph average" specified, so for each subject I have both  
\<subject\>-lh.stc. and \<subject\>-rh.stc. For mne\_average\_estimates, my  
description file looks like this:

stc /\<path\_to\_my\_data\>/subj001\_ave-lh.stc  
stc /\<path\_to\_my\_data\>/subj001\_ave-rh.stc  
stc /\<path\_to\_my\_data\>/subj002\_ave-lh.stc  
stc /\<path\_to\_my\_data\>/subj002\_ave-rh.stc  
stc /\<path\_to\_my\_data\>/subj003\_ave-lh.stc  
...  
deststc /\<path\_to\_my\_data\>/averagestc

(I also tried the same thing but without including the "-lh.stc" and  
"-rh.stc" in my description file, but I got the same error.)

Any suggestions or guidance would be greatly appreciated. Thank you very  
much!  
Steve Politzer-Ahles

---

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**Author:** ![system](https://global.discourse-cdn.com/free1/uploads/mne/original/1X/85cc6bd2b69cb698a166dc6d880fb550510d0144.jpeg) [@system](https://mne.discourse.group/u/system)\
**Post date:** [March 31, 2012, 8:47am UTC](https://mne.discourse.group/t/error-using-mne-average-estimates/422/2 "2012-03-31T08:47:57Z")

</div>

hi Steve,

In case you have not solved your problem yet, can you share a couple  
of stc files that cause  
the problem and give me the exact command line you typed?

Alex

---

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**Author:** ![system](https://global.discourse-cdn.com/free1/uploads/mne/original/1X/85cc6bd2b69cb698a166dc6d880fb550510d0144.jpeg) [@system](https://mne.discourse.group/u/system)\
**Post date:** [March 31, 2012, 10:44am UTC](https://mne.discourse.group/t/error-using-mne-average-estimates/422/3 "2012-03-31T10:44:22Z")

</div>

Hi Alex,

Thank you. Here are links to two of my stc files and to the  
mne\_average\_estimates description file:  
[http://dl.dropbox.com/u/9929284/AL023\_ave-rh.stc](http://dl.dropbox.com/u/9929284/AL023_ave-rh.stc)  
[http://dl.dropbox.com/u/9929284/AL023\_ave-lh.stc](http://dl.dropbox.com/u/9929284/AL023_ave-lh.stc)  
[http://dl.dropbox.com/u/9929284/stcdescrip](http://dl.dropbox.com/u/9929284/stcdescrip)

I made the stc files using the following command line:

mne\_make\_movie --subject $SUBJECT --meas

> $SAMPLE/MEG/$SUBJECT/$SUBJECT"\_ave.fif" --inv  
> $SAMPLE/MEG/$SUBJECT/$SUBJECT"\_ave-7-meg-inv.fif" --morph average --smooth  
> 5 --stc $SAMPLE/MEG/$SUBJECT"\_ave"

(My directory structure is, within $SAMPLE I have a /subjects folder with  
the MRI data and an /MEG folder with the MEG data.) I didn't use the --bmin  
and --bmax options because I already did baseline correction when I  
averaged the MEG data.

After creating stc files like that for every subject, I ran

mne\_average\_estimates --desc stcdescrip

using the attached description file.

Best,  
Steve

---

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**Author:** ![system](https://global.discourse-cdn.com/free1/uploads/mne/original/1X/85cc6bd2b69cb698a166dc6d880fb550510d0144.jpeg) [@system](https://mne.discourse.group/u/system)\
**Post date:** [March 18, 2014, 5:38pm UTC](https://mne.discourse.group/t/error-using-mne-average-estimates/422/4 "2014-03-18T17:38:01Z")

</div>

Hi,  
I was wondering whether this issue was solved, as I am having it as well (despite previously using identically scripted commands and .desc files to successfully make average stc files on a different data set).  
The error doesn't provide much info - after compiling the individual stc files, after 'Temporal resampling...' the first subject stc file, it simply says [failed].  
Any ideas?

Thanks,  
Kestas

> Hi Alex,
> 
> Thank you. Here are links to two of my stc files and to the mne\_average\_estimates description file:  
> [http://dl.dropbox.com/u/9929284/AL023\_ave-rh.stc](http://dl.dropbox.com/u/9929284/AL023_ave-rh.stc)  
> [http://dl.dropbox.com/u/9929284/AL023\_ave-lh.stc](http://dl.dropbox.com/u/9929284/AL023_ave-lh.stc)  
> [http://dl.dropbox.com/u/9929284/stcdescrip](http://dl.dropbox.com/u/9929284/stcdescrip)
> 
> I made the stc files using the following command line:
> 
> mne\_make\_movie --subject $SUBJECT --meas $SAMPLE/MEG/$SUBJECT/$SUBJECT"\_ave.fif" --inv $SAMPLE/MEG/$SUBJECT/$SUBJECT"\_ave-7-meg-inv.fif" --morph average --smooth 5 --stc $SAMPLE/MEG/$SUBJECT"\_ave"
> 
> (My directory structure is, within $SAMPLE I have a /subjects folder with the MRI data and an /MEG folder with the MEG data.) I didn't use the --bmin and --bmax options because I already did baseline correction when I averaged the MEG data.
> 
> After creating stc files like that for every subject, I ran
> 
> mne\_average\_estimates --desc stcdescrip
> 
> using the attached description file.
> 
> Best,  
> Steve
> 
> hi Steve,
> 
> In case you have not solved your problem yet, can you share a couple  
> of stc files that cause  
> the problem and give me the exact command line you typed?
> 
> Alex
> 
> \> Hello,  
> \>  
> \> I'm encountering an error running mne\_average\_estimates. The program  
> \> successfully loads all my stc files and sets up the time scale, but then I  
> \> get:  
> \>  
> \> Temporal resampling...  
> \> /\<path to my data\>/subj001\_ave-lh.stc .. LH .. [failed]  
> \>  
> \> Before running mne\_average\_estimates, I had first created an average brain  
> \> in Freesurfer (make\_average\_subject), then created morph maps from each  
> \> subject to the average brain (mne\_make\_morph\_maps --from \<subject\> --to  
> \> average), then for each subject did current estimates using mne\_make\_movie  
> \> with "--morph average" specified, so for each subject I have both  
> \> \<subject\>-lh.stc. and \<subject\>-rh.stc. For mne\_average\_estimates, my  
> \> description file looks like this:  
> \>  
> \> stc /\<path\_to\_my\_data\>/subj001\_ave-lh.stc  
> \> stc /\<path\_to\_my\_data\>/subj001\_ave-rh.stc  
> \> stc /\<path\_to\_my\_data\>/subj002\_ave-lh.stc  
> \> stc /\<path\_to\_my\_data\>/subj002\_ave-rh.stc  
> \> stc /\<path\_to\_my\_data\>/subj003\_ave-lh.stc  
> \> ...  
> \> deststc /\<path\_to\_my\_data\>/averagestc  
> \>  
> \> (I also tried the same thing but without including the "-lh.stc" and  
> \> "-rh.stc" in my description file, but I got the same error.)  
> \>  
> \> Any suggestions or guidance would be greatly appreciated. Thank you very  
> \> much!  
> \> Steve Politzer-Ahles  
> \>  
> \> --  
> \> Stephen Politzer-Ahles  
> \> University of Kansas  
> \> Linguistics Department  
> \> [http://www.linguistics.ku.edu/](http://www.linguistics.ku.edu/)  
> \>  
> \> \_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_  
> \> Mne\_analysis mailing list  
> \> Mne\_analysis at nmr.mgh.harvard.edu  
> \> [https://mail.nmr.mgh.harvard.edu/mailman/listinfo/mne\_analysis](https://mail.nmr.mgh.harvard.edu/mailman/listinfo/mne_analysis)  
> \>  
> \>  
> \> The information in this e-mail is intended only for the person to whom it is  
> \> addressed. If you believe this e-mail was sent to you in error and the  
> \> e-mail  
> \> contains patient information, please contact the Partners Compliance  
> \> HelpLine at  
> \> [http://www.partners.org/complianceline](http://www.partners.org/complianceline) . If the e-mail was sent to you in  
> \> error  
> \> but does not contain patient information, please contact the sender and  
> \> properly  
> \> dispose of the e-mail.  
> \>
> 
> --  
> Stephen Politzer-Ahles  
> University of Kansas  
> Linguistics Department  
> [http://www.linguistics.ku.edu/](http://www.linguistics.ku.edu/)  
> \_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_  
> Mne\_analysis mailing list  
> Mne\_analysis at nmr.mgh.harvard.edu  
> [https://mail.nmr.mgh.harvard.edu/mailman/listinfo/mne\_analysis](https://mail.nmr.mgh.harvard.edu/mailman/listinfo/mne_analysis)

Kestas Kveraga, Ph.D.  
Instructor in Radiology/Neuroscience  
Martinos Center for Biomedical Imaging  
MGH-Harvard Medical School

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**Author:** ![system](https://global.discourse-cdn.com/free1/uploads/mne/original/1X/85cc6bd2b69cb698a166dc6d880fb550510d0144.jpeg) [@system](https://mne.discourse.group/u/system)\
**Post date:** [March 18, 2014, 6:42pm UTC](https://mne.discourse.group/t/error-using-mne-average-estimates/422/5 "2014-03-18T18:42:51Z")

</div>

Hi Kestas,

In my case, the problem was solved by adding libgfortran.so.1 to my  
library; the rest of this discussion must have been off-list or ended up in  
another thread. I believe somewhere on the list, someone sent me (via  
attachment) a copy of this file which I could download and put in /usr/lib64/,  
which fixed the issue.

Best,  
Steve

Stephen Politzer-Ahles  
New York University, Abu Dhabi  
Neuroscience of Language Lab  
[http://www.nyu.edu/projects/politzer-ahles/](http://www.nyu.edu/projects/politzer-ahles/)

---

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**Author:** ![system](https://global.discourse-cdn.com/free1/uploads/mne/original/1X/85cc6bd2b69cb698a166dc6d880fb550510d0144.jpeg) [@system](https://mne.discourse.group/u/system)\
**Post date:** [March 18, 2014, 8:10pm UTC](https://mne.discourse.group/t/error-using-mne-average-estimates/422/6 "2014-03-18T20:10:59Z")

</div>

Hi Steve,  
but I'm running a network version of MNE at MGH, so that should not be a problem?  
thanks,  
Kestas

> Hi Kestas,
> 
> In my case, the problem was solved by adding libgfortran.so.1 to my library; the rest of this discussion must have been off-list or ended up in another thread. I believe somewhere on the list, someone sent me (via attachment) a copy of this file which I could download and put in /usr/lib64/, which fixed the issue.
> 
> Best,  
> Steve
> 
> Stephen Politzer-Ahles  
> New York University, Abu Dhabi  
> Neuroscience of Language Lab  
> [http://www.nyu.edu/projects/politzer-ahles/](http://www.nyu.edu/projects/politzer-ahles/)
> 
> Hi,  
> I was wondering whether this issue was solved, as I am having it as well (despite previously using identically scripted commands and .desc files to successfully make average stc files on a different data set).  
> The error doesn't provide much info - after compiling the individual stc files, after 'Temporal resampling...' the first subject stc file, it simply says [failed].  
> Any ideas?
> 
> Thanks,  
> Kestas
> 
> > Hi Alex,
> > 
> > Thank you. Here are links to two of my stc files and to the mne\_average\_estimates description file:  
> > [http://dl.dropbox.com/u/9929284/AL023\_ave-rh.stc](http://dl.dropbox.com/u/9929284/AL023_ave-rh.stc)  
> > [http://dl.dropbox.com/u/9929284/AL023\_ave-lh.stc](http://dl.dropbox.com/u/9929284/AL023_ave-lh.stc)  
> > [http://dl.dropbox.com/u/9929284/stcdescrip](http://dl.dropbox.com/u/9929284/stcdescrip)
> > 
> > I made the stc files using the following command line:
> > 
> > mne\_make\_movie --subject $SUBJECT --meas $SAMPLE/MEG/$SUBJECT/$SUBJECT"\_ave.fif" --inv $SAMPLE/MEG/$SUBJECT/$SUBJECT"\_ave-7-meg-inv.fif" --morph average --smooth 5 --stc $SAMPLE/MEG/$SUBJECT"\_ave"
> > 
> > (My directory structure is, within $SAMPLE I have a /subjects folder with the MRI data and an /MEG folder with the MEG data.) I didn't use the --bmin and --bmax options because I already did baseline correction when I averaged the MEG data.
> > 
> > After creating stc files like that for every subject, I ran
> > 
> > mne\_average\_estimates --desc stcdescrip
> > 
> > using the attached description file.
> > 
> > Best,  
> > Steve
> > 
> > hi Steve,
> > 
> > In case you have not solved your problem yet, can you share a couple  
> > of stc files that cause  
> > the problem and give me the exact command line you typed?
> > 
> > Alex
> > 
> > \> Hello,  
> > \>  
> > \> I'm encountering an error running mne\_average\_estimates. The program  
> > \> successfully loads all my stc files and sets up the time scale, but then I  
> > \> get:  
> > \>  
> > \> Temporal resampling...  
> > \> /\<path to my data\>/subj001\_ave-lh.stc .. LH .. [failed]  
> > \>  
> > \> Before running mne\_average\_estimates, I had first created an average brain  
> > \> in Freesurfer (make\_average\_subject), then created morph maps from each  
> > \> subject to the average brain (mne\_make\_morph\_maps --from \<subject\> --to  
> > \> average), then for each subject did current estimates using mne\_make\_movie  
> > \> with "--morph average" specified, so for each subject I have both  
> > \> \<subject\>-lh.stc. and \<subject\>-rh.stc. For mne\_average\_estimates, my  
> > \> description file looks like this:  
> > \>  
> > \> stc /\<path\_to\_my\_data\>/subj001\_ave-lh.stc  
> > \> stc /\<path\_to\_my\_data\>/subj001\_ave-rh.stc  
> > \> stc /\<path\_to\_my\_data\>/subj002\_ave-lh.stc  
> > \> stc /\<path\_to\_my\_data\>/subj002\_ave-rh.stc  
> > \> stc /\<path\_to\_my\_data\>/subj003\_ave-lh.stc  
> > \> ...  
> > \> deststc /\<path\_to\_my\_data\>/averagestc  
> > \>  
> > \> (I also tried the same thing but without including the "-lh.stc" and  
> > \> "-rh.stc" in my description file, but I got the same error.)  
> > \>  
> > \> Any suggestions or guidance would be greatly appreciated. Thank you very  
> > \> much!  
> > \> Steve Politzer-Ahles  
> > \>  
> > \> --  
> > \> Stephen Politzer-Ahles  
> > \> University of Kansas  
> > \> Linguistics Department  
> > \> [http://www.linguistics.ku.edu/](http://www.linguistics.ku.edu/)  
> > \>  
> > \> \_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_  
> > \> Mne\_analysis mailing list  
> > \> Mne\_analysis at nmr.mgh.harvard.edu  
> > \> [Mne\_analysis Info Page](https://mail.nmr.mgh.harvard.edu/mailman/listinfo/mne_analysis)  
> > \>  
> > \>  
> > \> The information in this e-mail is intended only for the person to whom it is  
> > \> addressed. If you believe this e-mail was sent to you in error and the  
> > \> e-mail  
> > \> contains patient information, please contact the Partners Compliance  
> > \> HelpLine at  
> > \> [MyComplianceReport.com: Compliance and Ethics Reporting](http://www.partners.org/complianceline) . If the e-mail was sent to you in  
> > \> error  
> > \> but does not contain patient information, please contact the sender and  
> > \> properly  
> > \> dispose of the e-mail.  
> > \>
> > 
> > --  
> > Stephen Politzer-Ahles  
> > University of Kansas  
> > Linguistics Department  
> > [http://www.linguistics.ku.edu/](http://www.linguistics.ku.edu/)  
> > \_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_  
> > Mne\_analysis mailing list  
> > Mne\_analysis at nmr.mgh.harvard.edu  
> > [Mne\_analysis Info Page](https://mail.nmr.mgh.harvard.edu/mailman/listinfo/mne_analysis)
> 
> Kestas Kveraga, Ph.D.  
> Instructor in Radiology/Neuroscience  
> Martinos Center for Biomedical Imaging  
> MGH-Harvard Medical School

Kestas Kveraga, Ph.D.  
Instructor in Radiology/Neuroscience  
Martinos Center for Biomedical Imaging  
MGH-Harvard Medical School

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**Author:** ![system](https://global.discourse-cdn.com/free1/uploads/mne/original/1X/85cc6bd2b69cb698a166dc6d880fb550510d0144.jpeg) [@system](https://mne.discourse.group/u/system)\
**Post date:** [March 18, 2014, 9:36pm UTC](https://mne.discourse.group/t/error-using-mne-average-estimates/422/7 "2014-03-18T21:36:34Z")

</div>

Hi Kestas,  
&nbsp;&nbsp;&nbsp;Just in case: One mistake that I have run into the past when resampling  
the STC is that I would be missing the end point samples when  
specifying tmin, tmax, tstep. For instance, the last STC sample would  
be something like 1.995s for a different data set epoched with the same  
code, whereas tmax is set to 2000 ms.

Hari

---

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**Author:** ![system](https://global.discourse-cdn.com/free1/uploads/mne/original/1X/85cc6bd2b69cb698a166dc6d880fb550510d0144.jpeg) [@system](https://mne.discourse.group/u/system)\
**Post date:** [March 19, 2014, 3:07pm UTC](https://mne.discourse.group/t/error-using-mne-average-estimates/422/8 "2014-03-19T15:07:03Z")

</div>

Hi Kestas,

Perhaps you could describe your specific problem for us, since it is  
not the same as the previous one.

D

---

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**Author:** ![system](https://global.discourse-cdn.com/free1/uploads/mne/original/1X/85cc6bd2b69cb698a166dc6d880fb550510d0144.jpeg) [@system](https://mne.discourse.group/u/system)\
**Post date:** [March 19, 2014, 3:25pm UTC](https://mne.discourse.group/t/error-using-mne-average-estimates/422/9 "2014-03-19T15:25:19Z")

</div>

Hi Hari,  
thank you for your suggestion, I will try to tinker with the timing parameters and report back.  
Kestas

> Hi Kestas,  
> &nbsp;&nbsp;Just in case: One mistake that I have run into the past when resampling  
> the STC is that I would be missing the end point samples when  
> specifying tmin, tmax, tstep. For instance, the last STC sample would  
> be something like 1.995s for a different data set epoched with the same  
> code, whereas tmax is set to 2000 ms.
> 
> Hari
> 
> > Hi Steve,  
> > but I'm running a network version of MNE at MGH, so that should not be a  
> > problem?  
> > thanks,  
> > Kestas
> > 
> > > Hi Kestas,
> > > 
> > > In my case, the problem was solved by adding libgfortran.so.1 to my  
> > > library; the rest of this discussion must have been off-list or ended up  
> > > in another thread. I believe somewhere on the list, someone sent me (via  
> > > attachment) a copy of this file which I could download and put in  
> > > /usr/lib64/, which fixed the issue.
> > > 
> > > Best,  
> > > Steve
> > > 
> > > Stephen Politzer-Ahles  
> > > New York University, Abu Dhabi  
> > > Neuroscience of Language Lab  
> > > [http://www.nyu.edu/projects/politzer-ahles/](http://www.nyu.edu/projects/politzer-ahles/)
> > > 
> > > Hi,  
> > > I was wondering whether this issue was solved, as I am having it as well  
> > > (despite previously using identically scripted commands and .desc files  
> > > to successfully make average stc files on a different data set).  
> > > The error doesn't provide much info - after compiling the individual stc  
> > > files, after 'Temporal resampling...' the first subject stc file, it  
> > > simply says [failed].  
> > > Any ideas?
> > > 
> > > Thanks,  
> > > Kestas
> > > 
> > > > Hi Alex,
> > > > 
> > > > Thank you. Here are links to two of my stc files and to the  
> > > > mne\_average\_estimates description file:  
> > > > [http://dl.dropbox.com/u/9929284/AL023\_ave-rh.stc](http://dl.dropbox.com/u/9929284/AL023_ave-rh.stc)  
> > > > [http://dl.dropbox.com/u/9929284/AL023\_ave-lh.stc](http://dl.dropbox.com/u/9929284/AL023_ave-lh.stc)  
> > > > [http://dl.dropbox.com/u/9929284/stcdescrip](http://dl.dropbox.com/u/9929284/stcdescrip)
> > > > 
> > > > I made the stc files using the following command line:
> > > > 
> > > > mne\_make\_movie --subject $SUBJECT --meas  
> > > > $SAMPLE/MEG/$SUBJECT/$SUBJECT"\_ave.fif" --inv  
> > > > $SAMPLE/MEG/$SUBJECT/$SUBJECT"\_ave-7-meg-inv.fif" --morph average  
> > > > --smooth 5 --stc $SAMPLE/MEG/$SUBJECT"\_ave"
> > > > 
> > > > (My directory structure is, within $SAMPLE I have a /subjects folder  
> > > > with the MRI data and an /MEG folder with the MEG data.) I didn't use  
> > > > the --bmin and --bmax options because I already did baseline correction  
> > > > when I averaged the MEG data.
> > > > 
> > > > After creating stc files like that for every subject, I ran
> > > > 
> > > > mne\_average\_estimates --desc stcdescrip
> > > > 
> > > > using the attached description file.
> > > > 
> > > > Best,  
> > > > Steve
> > > > 
> > > > hi Steve,
> > > > 
> > > > In case you have not solved your problem yet, can you share a couple  
> > > > of stc files that cause  
> > > > the problem and give me the exact command line you typed?
> > > > 
> > > > Alex
> > > > 
> > > > > Hello,
> > > > > 
> > > > > I'm encountering an error running mne\_average\_estimates. The program  
> > > > > successfully loads all my stc files and sets up the time scale, but
> > > > 
> > > > then I
> > > > 
> > > > > get:
> > > > > 
> > > > > Temporal resampling...  
> > > > > /\<path to my data\>/subj001\_ave-lh.stc .. LH .. [failed]
> > > > > 
> > > > > Before running mne\_average\_estimates, I had first created an average
> > > > 
> > > > brain
> > > > 
> > > > > in Freesurfer (make\_average\_subject), then created morph maps from
> > > > 
> > > > each
> > > > 
> > > > > subject to the average brain (mne\_make\_morph\_maps --from \<subject\>
> > > > 
> > > > --to
> > > > 
> > > > > average), then for each subject did current estimates using
> > > > 
> > > > mne\_make\_movie
> > > > 
> > > > > with "--morph average" specified, so for each subject I have both  
> > > > > \<subject\>-lh.stc. and \<subject\>-rh.stc. For mne\_average\_estimates, my  
> > > > > description file looks like this:
> > > > > 
> > > > > stc /\<path\_to\_my\_data\>/subj001\_ave-lh.stc  
> > > > > stc /\<path\_to\_my\_data\>/subj001\_ave-rh.stc  
> > > > > stc /\<path\_to\_my\_data\>/subj002\_ave-lh.stc  
> > > > > stc /\<path\_to\_my\_data\>/subj002\_ave-rh.stc  
> > > > > stc /\<path\_to\_my\_data\>/subj003\_ave-lh.stc  
> > > > > ...  
> > > > > deststc /\<path\_to\_my\_data\>/averagestc
> > > > > 
> > > > > (I also tried the same thing but without including the "-lh.stc" and  
> > > > > "-rh.stc" in my description file, but I got the same error.)
> > > > > 
> > > > > Any suggestions or guidance would be greatly appreciated. Thank you
> > > > 
> > > > very
> > > > 
> > > > > much!  
> > > > > Steve Politzer-Ahles
> > > > > 
> > > > > --  
> > > > > Stephen Politzer-Ahles  
> > > > > University of Kansas  
> > > > > Linguistics Department  
> > > > > [http://www.linguistics.ku.edu/](http://www.linguistics.ku.edu/)
> > > > > 
> > > > > \_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_  
> > > > > Mne\_analysis mailing list  
> > > > > Mne\_analysis at nmr.mgh.harvard.edu  
> > > > > [Mne\_analysis Info Page](https://mail.nmr.mgh.harvard.edu/mailman/listinfo/mne_analysis)
> > > > > 
> > > > > The information in this e-mail is intended only for the person to
> > > > 
> > > > whom it is
> > > > 
> > > > > addressed. If you believe this e-mail was sent to you in error and
> > > > 
> > > > the
> > > > 
> > > > > e-mail  
> > > > > contains patient information, please contact the Partners Compliance  
> > > > > HelpLine at  
> > > > > [MyComplianceReport.com: Compliance and Ethics Reporting](http://www.partners.org/complianceline) . If the e-mail was sent to
> > > > 
> > > > you in
> > > > 
> > > > > error  
> > > > > but does not contain patient information, please contact the sender
> > > > 
> > > > and
> > > > 
> > > > > properly  
> > > > > dispose of the e-mail.
> > > > 
> > > > --  
> > > > Stephen Politzer-Ahles  
> > > > University of Kansas  
> > > > Linguistics Department  
> > > > [http://www.linguistics.ku.edu/](http://www.linguistics.ku.edu/)  
> > > > \_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_  
> > > > Mne\_analysis mailing list  
> > > > Mne\_analysis at nmr.mgh.harvard.edu  
> > > > [Mne\_analysis Info Page](https://mail.nmr.mgh.harvard.edu/mailman/listinfo/mne_analysis)
> > > 
> > > Kestas Kveraga, Ph.D.  
> > > Instructor in Radiology/Neuroscience  
> > > Martinos Center for Biomedical Imaging  
> > > MGH-Harvard Medical School
> > 
> > Kestas Kveraga, Ph.D.  
> > Instructor in Radiology/Neuroscience  
> > Martinos Center for Biomedical Imaging  
> > MGH-Harvard Medical School
> > 
> > \_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_  
> > Mne\_analysis mailing list  
> > Mne\_analysis at nmr.mgh.harvard.edu  
> > [Mne\_analysis Info Page](https://mail.nmr.mgh.harvard.edu/mailman/listinfo/mne_analysis)
> 
> --  
> Hari Bharadwaj  
> PhD Candidate, Biomedical Engineering,  
> Boston University  
> 677 Beacon St.,  
> Boston, MA 02215
> 
> Martinos Center for Biomedical Imaging,  
> Massachusetts General Hospital  
> 149 Thirteenth Street,  
> Charlestown, MA 02129
> 
> hari at nmr.mgh.harvard.edu  
> Ph: 734-883-5954
> 
> \_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_  
> Mne\_analysis mailing list  
> Mne\_analysis at nmr.mgh.harvard.edu  
> [Mne\_analysis Info Page](https://mail.nmr.mgh.harvard.edu/mailman/listinfo/mne_analysis)

Kestas Kveraga, Ph.D.  
Instructor in Radiology/Neuroscience  
Martinos Center for Biomedical Imaging  
MGH-Harvard Medical School

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**Author:** ![system](https://global.discourse-cdn.com/free1/uploads/mne/original/1X/85cc6bd2b69cb698a166dc6d880fb550510d0144.jpeg) [@system](https://mne.discourse.group/u/system)\
**Post date:** [March 19, 2014, 3:38pm UTC](https://mne.discourse.group/t/error-using-mne-average-estimates/422/10 "2014-03-19T15:38:09Z")

</div>

Hi Dan,  
I'm running mne\_average\_estimates --desc [descfileaname]  
which lists individual stc files morphed to a single subject (I've used fsaverage and one of the subjects in the study to morph to).  
The individual stc files are fine and display expected activity displayed on the surface to which they were morphed.  
As I said before:

> > > The error doesn't provide much info - after compiling the individual stc  
> > > files, after 'Temporal resampling...' the first subject stc file, it simply  
> > > says [failed].

the stc files were made with timing parameters - tmin 0 --tmax 500 (or --tmax 1000) --tstep 10 (or 5) --smooth 6

Could those timing parameters be a problem as Hari suggested? Or something else?  
thanks,  
Kestas

> Hi Kestas,
> 
> Perhaps you could describe your specific problem for us, since it is  
> not the same as the previous one.
> 
> D
> 
> > Hi Steve,  
> > but I'm running a network version of MNE at MGH, so that should not be a  
> > problem?  
> > thanks,  
> > Kestas
> > 
> > Hi Kestas,
> > 
> > In my case, the problem was solved by adding libgfortran.so.1 to my library;  
> > the rest of this discussion must have been off-list or ended up in another  
> > thread. I believe somewhere on the list, someone sent me (via attachment) a  
> > copy of this file which I could download and put in /usr/lib64/, which  
> > fixed the issue.
> > 
> > Best,  
> > Steve
> > 
> > Stephen Politzer-Ahles  
> > New York University, Abu Dhabi  
> > Neuroscience of Language Lab  
> > [http://www.nyu.edu/projects/politzer-ahles/](http://www.nyu.edu/projects/politzer-ahles/)
> > 
> > > Hi,  
> > > I was wondering whether this issue was solved, as I am having it as well  
> > > (despite previously using identically scripted commands and .desc files to  
> > > successfully make average stc files on a different data set).  
> > > The error doesn't provide much info - after compiling the individual stc  
> > > files, after 'Temporal resampling...' the first subject stc file, it simply  
> > > says [failed].  
> > > Any ideas?
> > > 
> > > Thanks,  
> > > Kestas
> > > 
> > > Hi Alex,
> > > 
> > > Thank you. Here are links to two of my stc files and to the  
> > > mne\_average\_estimates description file:  
> > > [http://dl.dropbox.com/u/9929284/AL023\_ave-rh.stc](http://dl.dropbox.com/u/9929284/AL023_ave-rh.stc)  
> > > [http://dl.dropbox.com/u/9929284/AL023\_ave-lh.stc](http://dl.dropbox.com/u/9929284/AL023_ave-lh.stc)  
> > > [http://dl.dropbox.com/u/9929284/stcdescrip](http://dl.dropbox.com/u/9929284/stcdescrip)
> > > 
> > > I made the stc files using the following command line:
> > > 
> > > > mne\_make\_movie --subject $SUBJECT --meas  
> > > > $SAMPLE/MEG/$SUBJECT/$SUBJECT"\_ave.fif" --inv  
> > > > $SAMPLE/MEG/$SUBJECT/$SUBJECT"\_ave-7-meg-inv.fif" --morph average --smooth 5  
> > > > --stc $SAMPLE/MEG/$SUBJECT"\_ave"
> > > 
> > > (My directory structure is, within $SAMPLE I have a /subjects folder with  
> > > the MRI data and an /MEG folder with the MEG data.) I didn't use the --bmin  
> > > and --bmax options because I already did baseline correction when I averaged  
> > > the MEG data.
> > > 
> > > After creating stc files like that for every subject, I ran
> > > 
> > > mne\_average\_estimates --desc stcdescrip
> > > 
> > > using the attached description file.
> > > 
> > > Best,  
> > > Steve
> > > 
> > > > hi Steve,
> > > > 
> > > > In case you have not solved your problem yet, can you share a couple  
> > > > of stc files that cause  
> > > > the problem and give me the exact command line you typed?
> > > > 
> > > > Alex
> > > > 
> > > > > Hello,
> > > > > 
> > > > > I'm encountering an error running mne\_average\_estimates. The program  
> > > > > successfully loads all my stc files and sets up the time scale, but  
> > > > > then I  
> > > > > get:
> > > > > 
> > > > > Temporal resampling...  
> > > > > /\<path to my data\>/subj001\_ave-lh.stc .. LH .. [failed]
> > > > > 
> > > > > Before running mne\_average\_estimates, I had first created an average  
> > > > > brain  
> > > > > in Freesurfer (make\_average\_subject), then created morph maps from each  
> > > > > subject to the average brain (mne\_make\_morph\_maps --from \<subject\> --to  
> > > > > average), then for each subject did current estimates using  
> > > > > mne\_make\_movie  
> > > > > with "--morph average" specified, so for each subject I have both  
> > > > > \<subject\>-lh.stc. and \<subject\>-rh.stc. For mne\_average\_estimates, my  
> > > > > description file looks like this:
> > > > > 
> > > > > stc /\<path\_to\_my\_data\>/subj001\_ave-lh.stc  
> > > > > stc /\<path\_to\_my\_data\>/subj001\_ave-rh.stc  
> > > > > stc /\<path\_to\_my\_data\>/subj002\_ave-lh.stc  
> > > > > stc /\<path\_to\_my\_data\>/subj002\_ave-rh.stc  
> > > > > stc /\<path\_to\_my\_data\>/subj003\_ave-lh.stc  
> > > > > ...  
> > > > > deststc /\<path\_to\_my\_data\>/averagestc
> > > > > 
> > > > > (I also tried the same thing but without including the "-lh.stc" and  
> > > > > "-rh.stc" in my description file, but I got the same error.)
> > > > > 
> > > > > Any suggestions or guidance would be greatly appreciated. Thank you  
> > > > > very  
> > > > > much!  
> > > > > Steve Politzer-Ahles
> > > > > 
> > > > > --  
> > > > > Stephen Politzer-Ahles  
> > > > > University of Kansas  
> > > > > Linguistics Department  
> > > > > [http://www.linguistics.ku.edu/](http://www.linguistics.ku.edu/)
> > > > > 
> > > > > \_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_  
> > > > > Mne\_analysis mailing list  
> > > > > Mne\_analysis at nmr.mgh.harvard.edu  
> > > > > [https://mail.nmr.mgh.harvard.edu/mailman/listinfo/mne\_analysis](https://mail.nmr.mgh.harvard.edu/mailman/listinfo/mne_analysis)
> > > > > 
> > > > > The information in this e-mail is intended only for the person to whom  
> > > > > it is  
> > > > > addressed. If you believe this e-mail was sent to you in error and the  
> > > > > e-mail  
> > > > > contains patient information, please contact the Partners Compliance  
> > > > > HelpLine at  
> > > > > [http://www.partners.org/complianceline](http://www.partners.org/complianceline) . If the e-mail was sent to you  
> > > > > in  
> > > > > error  
> > > > > but does not contain patient information, please contact the sender and  
> > > > > properly  
> > > > > dispose of the e-mail.
> > > 
> > > --  
> > > Stephen Politzer-Ahles  
> > > University of Kansas  
> > > Linguistics Department  
> > > [http://www.linguistics.ku.edu/](http://www.linguistics.ku.edu/)  
> > > \_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_  
> > > Mne\_analysis mailing list  
> > > Mne\_analysis at nmr.mgh.harvard.edu  
> > > [https://mail.nmr.mgh.harvard.edu/mailman/listinfo/mne\_analysis](https://mail.nmr.mgh.harvard.edu/mailman/listinfo/mne_analysis)
> > > 
> > > Kestas Kveraga, Ph.D.  
> > > Instructor in Radiology/Neuroscience  
> > > Martinos Center for Biomedical Imaging  
> > > MGH-Harvard Medical School
> > 
> > Kestas Kveraga, Ph.D.  
> > Instructor in Radiology/Neuroscience  
> > Martinos Center for Biomedical Imaging  
> > MGH-Harvard Medical School
> > 
> > \_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_  
> > Mne\_analysis mailing list  
> > Mne\_analysis at nmr.mgh.harvard.edu  
> > [https://mail.nmr.mgh.harvard.edu/mailman/listinfo/mne\_analysis](https://mail.nmr.mgh.harvard.edu/mailman/listinfo/mne_analysis)
> > 
> > The information in this e-mail is intended only for the person to whom it is  
> > addressed. If you believe this e-mail was sent to you in error and the  
> > e-mail  
> > contains patient information, please contact the Partners Compliance  
> > HelpLine at  
> > [http://www.partners.org/complianceline](http://www.partners.org/complianceline) . If the e-mail was sent to you in  
> > error  
> > but does not contain patient information, please contact the sender and  
> > properly  
> > dispose of the e-mail.
> 
> \_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_  
> Mne\_analysis mailing list  
> Mne\_analysis at nmr.mgh.harvard.edu  
> [https://mail.nmr.mgh.harvard.edu/mailman/listinfo/mne\_analysis](https://mail.nmr.mgh.harvard.edu/mailman/listinfo/mne_analysis)

Kestas Kveraga, Ph.D.  
Instructor in Radiology/Neuroscience  
Martinos Center for Biomedical Imaging  
MGH-Harvard Medical School

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**Author:** ![system](https://global.discourse-cdn.com/free1/uploads/mne/original/1X/85cc6bd2b69cb698a166dc6d880fb550510d0144.jpeg) [@system](https://mne.discourse.group/u/system)\
**Post date:** [March 19, 2014, 5:17pm UTC](https://mne.discourse.group/t/error-using-mne-average-estimates/422/11 "2014-03-19T17:17:04Z")

</div>

They definitely could be the problem. I would try that first

---

<div class="post-metadata">

**Author:** ![system](https://global.discourse-cdn.com/free1/uploads/mne/original/1X/85cc6bd2b69cb698a166dc6d880fb550510d0144.jpeg) [@system](https://mne.discourse.group/u/system)\
**Post date:** [March 19, 2014, 7:48pm UTC](https://mne.discourse.group/t/error-using-mne-average-estimates/422/12 "2014-03-19T19:48:41Z")

</div>

It works now: it turned out to be tmin - it was different in the .desc by 0.035 s from the .ave parameters. It's a bit strange as a difference of 0.03 s previously did not cause a problem.  
Thanks for your suggestions!

> They definitely could be the problem. I would try that first
> 
> > Hi Dan,  
> > I'm running mne\_average\_estimates --desc [descfileaname]  
> > which lists individual stc files morphed to a single subject (I've used  
> > fsaverage and one of the subjects in the study to morph to).  
> > The individual stc files are fine and display expected activity displayed on  
> > the surface to which they were morphed.  
> > As I said before:
> > 
> > The error doesn't provide much info - after compiling the individual stc
> > 
> > files, after 'Temporal resampling...' the first subject stc file, it simply
> > 
> > says [failed].
> > 
> > the stc files were made with timing parameters - tmin 0 --tmax 500 (or  
> > --tmax 1000) --tstep 10 (or 5) --smooth 6
> > 
> > Could those timing parameters be a problem as Hari suggested? Or something  
> > else?  
> > thanks,  
> > Kestas
> > 
> > Hi Kestas,
> > 
> > Perhaps you could describe your specific problem for us, since it is  
> > not the same as the previous one.
> > 
> > D
> > 
> > Hi Steve,
> > 
> > but I'm running a network version of MNE at MGH, so that should not be a
> > 
> > problem?
> > 
> > thanks,
> > 
> > Kestas
> > 
> > Hi Kestas,
> > 
> > In my case, the problem was solved by adding libgfortran.so.1 to my library;
> > 
> > the rest of this discussion must have been off-list or ended up in another
> > 
> > thread. I believe somewhere on the list, someone sent me (via attachment) a
> > 
> > copy of this file which I could download and put in /usr/lib64/, which
> > 
> > fixed the issue.
> > 
> > Best,
> > 
> > Steve
> > 
> > Stephen Politzer-Ahles
> > 
> > New York University, Abu Dhabi
> > 
> > Neuroscience of Language Lab
> > 
> > [http://www.nyu.edu/projects/politzer-ahles/](http://www.nyu.edu/projects/politzer-ahles/)
> > 
> > Hi,
> > 
> > I was wondering whether this issue was solved, as I am having it as well
> > 
> > (despite previously using identically scripted commands and .desc files to
> > 
> > successfully make average stc files on a different data set).
> > 
> > The error doesn't provide much info - after compiling the individual stc
> > 
> > files, after 'Temporal resampling...' the first subject stc file, it simply
> > 
> > says [failed].
> > 
> > Any ideas?
> > 
> > Thanks,
> > 
> > Kestas
> > 
> > Hi Alex,
> > 
> > Thank you. Here are links to two of my stc files and to the
> > 
> > mne\_average\_estimates description file:
> > 
> > [http://dl.dropbox.com/u/9929284/AL023\_ave-rh.stc](http://dl.dropbox.com/u/9929284/AL023_ave-rh.stc)
> > 
> > [http://dl.dropbox.com/u/9929284/AL023\_ave-lh.stc](http://dl.dropbox.com/u/9929284/AL023_ave-lh.stc)
> > 
> > [http://dl.dropbox.com/u/9929284/stcdescrip](http://dl.dropbox.com/u/9929284/stcdescrip)
> > 
> > I made the stc files using the following command line:
> > 
> > mne\_make\_movie --subject $SUBJECT --meas
> > 
> > $SAMPLE/MEG/$SUBJECT/$SUBJECT"\_ave.fif" --inv
> > 
> > $SAMPLE/MEG/$SUBJECT/$SUBJECT"\_ave-7-meg-inv.fif" --morph average --smooth 5
> > 
> > --stc $SAMPLE/MEG/$SUBJECT"\_ave"
> > 
> > (My directory structure is, within $SAMPLE I have a /subjects folder with
> > 
> > the MRI data and an /MEG folder with the MEG data.) I didn't use the --bmin
> > 
> > and --bmax options because I already did baseline correction when I averaged
> > 
> > the MEG data.
> > 
> > After creating stc files like that for every subject, I ran
> > 
> > mne\_average\_estimates --desc stcdescrip
> > 
> > using the attached description file.
> > 
> > Best,
> > 
> > Steve
> > 
> > hi Steve,
> > 
> > In case you have not solved your problem yet, can you share a couple
> > 
> > of stc files that cause
> > 
> > the problem and give me the exact command line you typed?
> > 
> > Alex
> > 
> > Hello,
> > 
> > I'm encountering an error running mne\_average\_estimates. The program
> > 
> > successfully loads all my stc files and sets up the time scale, but
> > 
> > then I
> > 
> > get:
> > 
> > Temporal resampling...
> > 
> > /\<path to my data\>/subj001\_ave-lh.stc .. LH .. [failed]
> > 
> > Before running mne\_average\_estimates, I had first created an average
> > 
> > brain
> > 
> > in Freesurfer (make\_average\_subject), then created morph maps from each
> > 
> > subject to the average brain (mne\_make\_morph\_maps --from \<subject\> --to
> > 
> > average), then for each subject did current estimates using
> > 
> > mne\_make\_movie
> > 
> > with "--morph average" specified, so for each subject I have both
> > 
> > \<subject\>-lh.stc. and \<subject\>-rh.stc. For mne\_average\_estimates, my
> > 
> > description file looks like this:
> > 
> > stc /\<path\_to\_my\_data\>/subj001\_ave-lh.stc
> > 
> > stc /\<path\_to\_my\_data\>/subj001\_ave-rh.stc
> > 
> > stc /\<path\_to\_my\_data\>/subj002\_ave-lh.stc
> > 
> > stc /\<path\_to\_my\_data\>/subj002\_ave-rh.stc
> > 
> > stc /\<path\_to\_my\_data\>/subj003\_ave-lh.stc
> > 
> > ...
> > 
> > deststc /\<path\_to\_my\_data\>/averagestc
> > 
> > (I also tried the same thing but without including the "-lh.stc" and
> > 
> > "-rh.stc" in my description file, but I got the same error.)
> > 
> > Any suggestions or guidance would be greatly appreciated. Thank you
> > 
> > very
> > 
> > much!
> > 
> > Steve Politzer-Ahles
> > 
> > --
> > 
> > Stephen Politzer-Ahles
> > 
> > University of Kansas
> > 
> > Linguistics Department
> > 
> > [http://www.linguistics.ku.edu/](http://www.linguistics.ku.edu/)
> > 
> > \_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_
> > 
> > Mne\_analysis mailing list
> > 
> > Mne\_analysis at nmr.mgh.harvard.edu
> > 
> > [Mne\_analysis Info Page](https://mail.nmr.mgh.harvard.edu/mailman/listinfo/mne_analysis)
> > 
> > The information in this e-mail is intended only for the person to whom
> > 
> > it is
> > 
> > addressed. If you believe this e-mail was sent to you in error and the
> > 
> > e-mail
> > 
> > contains patient information, please contact the Partners Compliance
> > 
> > HelpLine at
> > 
> > [MyComplianceReport.com: Compliance and Ethics Reporting](http://www.partners.org/complianceline) . If the e-mail was sent to you
> > 
> > in
> > 
> > error
> > 
> > but does not contain patient information, please contact the sender and
> > 
> > properly
> > 
> > dispose of the e-mail.
> > 
> > --
> > 
> > Stephen Politzer-Ahles
> > 
> > University of Kansas
> > 
> > Linguistics Department
> > 
> > [http://www.linguistics.ku.edu/](http://www.linguistics.ku.edu/)
> > 
> > \_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_
> > 
> > Mne\_analysis mailing list
> > 
> > Mne\_analysis at nmr.mgh.harvard.edu
> > 
> > [Mne\_analysis Info Page](https://mail.nmr.mgh.harvard.edu/mailman/listinfo/mne_analysis)
> > 
> > Kestas Kveraga, Ph.D.
> > 
> > Instructor in Radiology/Neuroscience
> > 
> > Martinos Center for Biomedical Imaging
> > 
> > MGH-Harvard Medical School
> > 
> > Kestas Kveraga, Ph.D.
> > 
> > Instructor in Radiology/Neuroscience
> > 
> > Martinos Center for Biomedical Imaging
> > 
> > MGH-Harvard Medical School
> > 
> > \_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_
> > 
> > Mne\_analysis mailing list
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> > 
> > [Mne\_analysis Info Page](https://mail.nmr.mgh.harvard.edu/mailman/listinfo/mne_analysis)
> > 
> > The information in this e-mail is intended only for the person to whom it is
> > 
> > addressed. If you believe this e-mail was sent to you in error and the
> > 
> > e-mail
> > 
> > contains patient information, please contact the Partners Compliance
> > 
> > HelpLine at
> > 
> > [MyComplianceReport.com: Compliance and Ethics Reporting](http://www.partners.org/complianceline) . If the e-mail was sent to you in
> > 
> > error
> > 
> > but does not contain patient information, please contact the sender and
> > 
> > properly
> > 
> > dispose of the e-mail.
> > 
> > \_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_  
> > Mne\_analysis mailing list  
> > Mne\_analysis at nmr.mgh.harvard.edu  
> > [Mne\_analysis Info Page](https://mail.nmr.mgh.harvard.edu/mailman/listinfo/mne_analysis)
> > 
> > Kestas Kveraga, Ph.D.  
> > Instructor in Radiology/Neuroscience  
> > Martinos Center for Biomedical Imaging  
> > MGH-Harvard Medical School
> > 
> > \_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_  
> > Mne\_analysis mailing list  
> > Mne\_analysis at nmr.mgh.harvard.edu  
> > [Mne\_analysis Info Page](https://mail.nmr.mgh.harvard.edu/mailman/listinfo/mne_analysis)
> > 
> > The information in this e-mail is intended only for the person to whom it is  
> > addressed. If you believe this e-mail was sent to you in error and the  
> > e-mail  
> > contains patient information, please contact the Partners Compliance  
> > HelpLine at  
> > [MyComplianceReport.com: Compliance and Ethics Reporting](http://www.partners.org/complianceline) . If the e-mail was sent to you in  
> > error  
> > but does not contain patient information, please contact the sender and  
> > properly  
> > dispose of the e-mail.
> 
> \_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_\_  
> Mne\_analysis mailing list  
> Mne\_analysis at nmr.mgh.harvard.edu  
> [Mne\_analysis Info Page](https://mail.nmr.mgh.harvard.edu/mailman/listinfo/mne_analysis)

Kestas Kveraga, Ph.D.  
Instructor in Radiology/Neuroscience  
Martinos Center for Biomedical Imaging  
MGH-Harvard Medical School

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